In Partnership with AOL
  • Agriculture Business Research Institute - ABRI provides recording systems for all species of commercial livestock. Software offered include Dairy Express, Saltbush and Breedplan.
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  • ASReml Cookbook - Statistical software designed for fitting mixed models for large datasets. Contains commented code for univariate and multivariate analysis including longitudinal and spatial analysis.
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  • Big Bench Software - Commercial software for the management of transgenic mouse colonies. Windows and Mac OS X. Demo version available.
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  • DESIRE - Explore possible selection outcomes when goals (desired gains) are set for traits. This free WIN program is also contained in GENUP.
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  • DRIFT - Graphically represents the effect of genetic drift on gene frequency of one or more populations for a single locus, two allele model in a closed population using stochastic simulation methods. The DOS program is free.
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  • Finnish Forest Genetics and Tree Breeding - Links to population and quantitative genetic software of interest in tree improvement, but also useful in other species.
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  • GeneFlow Inc - This Virginia, USA company provides software (GeneFlow, SynerGene, QTLlocate) and services oriented towards plant breeding. Website does not give prices or operating systems supported.
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  • Genup - Free software to assist learning quantitative genetic concepts (animal breeding) for WIN.
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  • Ignacy Misztal - Animal breeding oriented programs for sparse matrix multiple trait REML and BLUP. Fortran source is free for research use.
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  • Laboratory of Plant Breeding, Wageningen - Offers free downloadable genetics and plant breeding related software.
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  • LAMS - Freeware record keeping system designed for a breeding colony of transgenic mice. Includes program description, system requirements, and installation instructions.
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  • Locus Technology, Inc - Colony management, supports creation and tracking of research animals and for transgenic and congenic lines, knockouts and outbred strains.
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  • MapPop - Software for selective mapping and bin mapping. Windows version, documentation and references are available for download.
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  • Pedigree Viewer - Unique display and examination tool for large pedigrees, with inbreeding and genetic merit data also. Free WIN program.
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  • PopGen - Software that models population genetics with emphasis on genetic drift, selection, and migration. Windows 95.
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  • PowerMarker - Set of statistical methods for discrete genetic data analysis, designed especially for microsatellite data analysis. Includes downloadable versions for Windows.
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  • Progeny Software - Supply pedigree drawing and genetic data management software for genetic research with a built-in customizable relational database.
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  • Quantitative Genetics Resources - List of resources with links to programs and notes on a range of subjects including animal and plant breeding, and evolutionary and human genetics.
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  • R/qtl: A QTL Mapping Environment - Program for mapping quantitative trait loci in experimental crosses. Includes sample graphics and tutorial in pdf format.
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  • VCE - Groeneveld's Variance Component Estimation software was developed for animal breeding problems. WIN and UNIX versions are free for research use. PEST documentation is also available here.
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Last update: November 9, 2014 at 6:45:08 UTC - edit